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j5 automated DNA assembly
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  | Introduction to DNA assembly
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  | The traditional multiple cloning site approach
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  | The DNA assembly challenge
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  | The SLIC, Gibson, CPEC, and SLiCE assembly methods (and GeneArt® Seamless, In-Fusion® Cloning)
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  | The Golden Gate assembly method (and MoClo and GoldenBraid)
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  | Bioinformatics/BioCAD prerequisites to SLIC/Gibson/CPEC/SLiCE and Golden Gate DNA assembly
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  | Process flow for j5 and integration with Registries of Biological Parts and BioCAD tools
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  | Brief survey of j5 functionality
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  | Specific examples of how to use j5
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  | SLIC/Gibson/CPEC/SLICE assembly (and GeneArt® Seamless and In-Fusion® Cloning)
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  | Combinatorial SLIC/Gibson/CPEC/SLICE assembly (and GeneArt® Seamless and In-Fusion® Cloning)
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  | Combinatorial Mock assembly
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  | Combinatorial Golden Gate assembly
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  | Condensation of multiple j5 assembly files
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  | Distribution of (Split and Pool) PCR reactions
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  | Conversion of SBOL XML <-> GenBank sequence files
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  | Local installation of j5 and DeviceEditor software
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  | j5 and DeviceEditor installation
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  | Comma separated value (.csv); FASTA (.fas) and Genbank (.gb) sequence files
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  | jbei-seq format (.xml) sequence files
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  | SBOL XML format (.xml) sequence files
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  | Sequences list file and zipped sequences file
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  | Target part order list file
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  | Master plasmids list file
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  | Master direct syntheses list file
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  | Assembly files to condense list file and zipped assembly files file
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  | Downstream automation parameters file
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  | Source plate list file and zipped source plate files file
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  | Combinatorial SLIC/Gibson/CPEC/SLiCE
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  | Combinatorial Mock Assembly
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  | Combinatorial Golden Gate
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  | Condensed multiple j5 assembly files
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  | Distribute PCR reactions file
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  | PR-PR distribute (split and pool) PCR reactions configuration (.pr) files
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  | Integration with the JBEI Registry/Vector Editor/DeviceEditor and Clotho BioCAD platforms
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  | XML-RPC web services provider
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  | Simplified j5 web interface
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  | Simplified j5 SBOL XML <-> GenBank conversion utility web interface
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  | Stand alone command line interface
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  | List of j5 error messages
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  | 5' phosphorylation of annealed DNA oligos
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  | People supporting the development of j5
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  | Research funds supporting the development of j5
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  | Non-commercial software license
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  | Commercial software license
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